Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 C1orf229-201ENST00000623686 2258 ntBASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-3A0A0B4J271 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 BX664725.1-201ENST00000438252 379 ntBASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 AC233723.2-201ENST00000623798 2106 ntBASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV12-3A0A0B4J271 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-3A0A0B4J271 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.52■□□□□ 0.23
TRAV12-3A0A0B4J271 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV12-3A0A0B4J271 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV12-3A0A0B4J271 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV12-3A0A0B4J271 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV12-3A0A0B4J271 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV12-3A0A0B4J271 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-3A0A0B4J271 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-3A0A0B4J271 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms