Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 KRT18P24-201ENST00000344739 1156 ntBASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRBV6-7A0A0A0MS04 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 BHLHE23-202ENST00000612929 1109 ntBASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-7A0A0A0MS04 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 MIR4281-201ENST00000580852 62 ntBASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 THA1P-201ENST00000590384 1145 ntBASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV6-7A0A0A0MS04 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 ESRRAP2-201ENST00000418437 1549 ntBASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 AC004448.1-201ENST00000458332 883 ntBASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-7A0A0A0MS04 AC079630.1-202ENST00000618127 1840 ntBASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 ATP5G2P3-201ENST00000429083 425 ntBASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 PVT1_1.1-201ENST00000615125 194 ntBASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV6-7A0A0A0MS04 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.64■□□□□ 0.58
TRBV6-7A0A0A0MS04 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV6-7A0A0A0MS04 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 AC004987.1-201ENST00000428627 508 ntBASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-7A0A0A0MS04 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV6-7A0A0A0MS04 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-7A0A0A0MS04 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms