Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 AC018755.3-202ENST00000596210 929 ntBASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV18A0A075B6X5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 AC131274.2-201ENST00000580697 1507 ntBASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 C11orf96-202ENST00000528572 1834 ntBASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 AC079630.1-202ENST00000618127 1840 ntBASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 AC092053.2-201ENST00000640557 1818 ntBASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV18A0A075B6X5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV18A0A075B6X5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRAV18A0A075B6X5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRAV18A0A075B6X5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 AC139530.1-201ENST00000575312 1977 ntBASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV18A0A075B6X5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 AC087393.1-201ENST00000582896 145 ntBASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV18A0A075B6X5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms