Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 PSAT1P2-201ENST00000426107 972 ntBASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AC114501.1-201ENST00000445949 172 ntBASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AC079250.1-201ENST00000456046 531 ntBASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AL356740.1-201ENST00000602192 1297 ntBASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20BQ9P0W2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 FAM21EP-201ENST00000417804 985 ntBASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC005077.3-201ENST00000449614 213 ntBASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 TREHP1-201ENST00000531328 465 ntBASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20BQ9P0W2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 TCAF1P1-201ENST00000414990 2232 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 BCAS2P2-201ENST00000425064 674 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC041040.1-201ENST00000425197 460 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms