Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MYOF-204ENST00000371489 1519 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AL117378.2-201ENST00000622916 1337 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 INTS9-213ENST00000521777 2430 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 DDC-212ENST00000615193 1674 ntTSL 3 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 FAM220CP-201ENST00000395253 831 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 RN7SKP228-201ENST00000411042 263 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 RPS20P25-201ENST00000412447 352 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AL049840.6-201ENST00000604583 345 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 MFSD8-234ENST00000641503 1082 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AP001528.3-201ENST00000624364 3249 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 LINC01806-202ENST00000439050 2333 ntTSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AC096720.2-201ENST00000623308 2458 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 AC009474.1-201ENST00000455096 1565 ntBASIC8.09□□□□□ -1.11
SVIPQ8NHG7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC8.09□□□□□ -1.12
SVIPQ8NHG7 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SVIPQ8NHG7 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
SVIPQ8NHG7 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.12
SVIPQ8NHG7 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC8.09□□□□□ -1.12
SVIPQ8NHG7 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ASB4-203ENST00000428113 1547 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC133637.1-201ENST00000624115 1537 ntBASIC8.08□□□□□ -1.12
SVIPQ8NHG7 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TBX15-202ENST00000369429 3504 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ZNF275-202ENST00000370251 6320 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 GABRB3-203ENST00000400188 1900 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC004847.1-201ENST00000568457 1911 ntBASIC8.08□□□□□ -1.12
SVIPQ8NHG7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 THYN1-201ENST00000341541 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TRPM8-202ENST00000355722 904 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ZNF839P1-201ENST00000403487 861 ntBASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 OR10G2-201ENST00000542433 1105 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 DUT-205ENST00000558813 769 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 PHF23-213ENST00000613632 850 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms