RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
RPRD2-202ENST00000369068 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
RPRD2-202ENST00000369068 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
RPRD2-202ENST00000369068 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
RPRD2-202ENST00000369068 MYT1Q01538 1121 aa16.8■□□□□ 0.28
RPRD2-202ENST00000369068 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
RPRD2-202ENST00000369068 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
RPRD2-202ENST00000369068 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
RPRD2-202ENST00000369068 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
RPRD2-202ENST00000369068 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
RPRD2-202ENST00000369068 APLP2Q06481 763 aa16.47■□□□□ 0.23
RPRD2-202ENST00000369068 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
RPRD2-202ENST00000369068 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
RPRD2-202ENST00000369068 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
RPRD2-202ENST00000369068 HRCP23327 699 aa16.2■□□□□ 0.18
RPRD2-202ENST00000369068 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
RPRD2-202ENST00000369068 NEFLP07196 543 aa16.12■□□□□ 0.17
RPRD2-202ENST00000369068 YTHDC1Q96MU7 727 aaKnown RBP16.08■□□□□ 0.17
RPRD2-202ENST00000369068 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
RPRD2-202ENST00000369068 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.15
RPRD2-202ENST00000369068 UBTFP17480 764 aaKnown RBP15.78■□□□□ 0.12
RPRD2-202ENST00000369068 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
RPRD2-202ENST00000369068 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
RPRD2-202ENST00000369068 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
RPRD2-202ENST00000369068 DAXXQ9UER7 740 aaPredicted RBP15.59■□□□□ 0.09
RPRD2-202ENST00000369068 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
RPRD2-202ENST00000369068 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
RPRD2-202ENST00000369068 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
RPRD2-202ENST00000369068 GTF3C3Q9Y5Q9 886 aa15.49■□□□□ 0.07
RPRD2-202ENST00000369068 RTL5Q5HYW3 569 aaPredicted RBP15.48■□□□□ 0.07
RPRD2-202ENST00000369068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
RPRD2-202ENST00000369068 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
RPRD2-202ENST00000369068 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
RPRD2-202ENST00000369068 ITGAEP38570 1179 aa15.31■□□□□ 0.04
RPRD2-202ENST00000369068 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
RPRD2-202ENST00000369068 POLR3GLQ9BT43 218 aa15.23■□□□□ 0.03
RPRD2-202ENST00000369068 BCANQ96GW7 911 aa15.2■□□□□ 0.02
RPRD2-202ENST00000369068 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
RPRD2-202ENST00000369068 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
RPRD2-202ENST00000369068 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
RPRD2-202ENST00000369068 ANP32CO43423 234 aa15.04■□□□□ -0
RPRD2-202ENST00000369068 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
RPRD2-202ENST00000369068 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
RPRD2-202ENST00000369068 NEUROD1Q13562 356 aa14.92□□□□□ -0.02
RPRD2-202ENST00000369068 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
RPRD2-202ENST00000369068 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
RPRD2-202ENST00000369068 EIF5BO60841 1220 aaKnown RBP14.86□□□□□ -0.03
RPRD2-202ENST00000369068 FKBP8Q14318 412 aa14.83□□□□□ -0.04
RPRD2-202ENST00000369068 TRIM52Q96A61 297 aa14.8□□□□□ -0.04
RPRD2-202ENST00000369068 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
RPRD2-202ENST00000369068 GLIPR1L2Q4G1C9 344 aa14.77□□□□□ -0.05
RPRD2-202ENST00000369068 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
RPRD2-202ENST00000369068 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
RPRD2-202ENST00000369068 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
RPRD2-202ENST00000369068 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
RPRD2-202ENST00000369068 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPRD2-202ENST00000369068 CANXP27824 592 aaKnown RBP14.62□□□□□ -0.07
RPRD2-202ENST00000369068 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
RPRD2-202ENST00000369068 ANP32EQ9BTT0 268 aa14.61□□□□□ -0.07
RPRD2-202ENST00000369068 NBR1Q14596 966 aa14.61□□□□□ -0.07
RPRD2-202ENST00000369068 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
RPRD2-202ENST00000369068 MIER1Q8N108 512 aa14.58□□□□□ -0.08
RPRD2-202ENST00000369068 DDX10Q13206 875 aaKnown RBP14.57□□□□□ -0.08
RPRD2-202ENST00000369068 CCDC136Q96JN2 1154 aa14.54□□□□□ -0.08
RPRD2-202ENST00000369068 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
RPRD2-202ENST00000369068 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
RPRD2-202ENST00000369068 FAM9BQ8IZU0 186 aa14.48□□□□□ -0.09
RPRD2-202ENST00000369068 HSP90AA1P07900 732 aaKnown RBP14.46□□□□□ -0.09
RPRD2-202ENST00000369068 NEFMP07197 916 aa14.41□□□□□ -0.1
RPRD2-202ENST00000369068 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
RPRD2-202ENST00000369068 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
RPRD2-202ENST00000369068 MRS2Q9HD23 443 aa14.37□□□□□ -0.11
RPRD2-202ENST00000369068 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
RPRD2-202ENST00000369068 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
RPRD2-202ENST00000369068 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
RPRD2-202ENST00000369068 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
RPRD2-202ENST00000369068 ARXQ96QS3 562 aa14.32□□□□□ -0.12
RPRD2-202ENST00000369068 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
RPRD2-202ENST00000369068 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
RPRD2-202ENST00000369068 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
RPRD2-202ENST00000369068 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
RPRD2-202ENST00000369068 ABCC9O60706 1549 aa14.28□□□□□ -0.12
RPRD2-202ENST00000369068 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
RPRD2-202ENST00000369068 TRIM44Q96DX7 344 aaPredicted RBP14.25□□□□□ -0.13
RPRD2-202ENST00000369068 BECN1Q14457 450 aa14.24□□□□□ -0.13
RPRD2-202ENST00000369068 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
RPRD2-202ENST00000369068 NOP58Q9Y2X3 529 aaKnown RBP14.21□□□□□ -0.13
RPRD2-202ENST00000369068 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
RPRD2-202ENST00000369068 SLC24A1O60721 1099 aa14.2□□□□□ -0.14
RPRD2-202ENST00000369068 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
RPRD2-202ENST00000369068 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
RPRD2-202ENST00000369068 HIRIP3Q9BW71 556 aaPredicted RBP14.18□□□□□ -0.14
RPRD2-202ENST00000369068 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
RPRD2-202ENST00000369068 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPRD2-202ENST00000369068 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPRD2-202ENST00000369068 EEA1Q15075 1411 aa14.18□□□□□ -0.14
RPRD2-202ENST00000369068 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
RPRD2-202ENST00000369068 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
RPRD2-202ENST00000369068 ARID3CA6NKF2 412 aa14.14□□□□□ -0.15
RPRD2-202ENST00000369068 DEKP35659 375 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms