Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 CFL1P6-201ENST00000400899 494 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 AL357563.1-201ENST00000404728 395 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 GNG10P1-201ENST00000452289 199 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 AC093826.1-201ENST00000508655 993 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 PIGCP1-201ENST00000527583 895 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 RN7SL736P-201ENST00000613111 269 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 Z82244.1-201ENST00000631502 840 ntBASIC15.01□□□□□ -0.01
NCKAP1LP55160 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.01□□□□□ -0.01
NCKAP1LP55160 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCKAP1LP55160 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15□□□□□ -0.01
NCKAP1LP55160 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15□□□□□ -0.01
NCKAP1LP55160 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15□□□□□ -0.01
NCKAP1LP55160 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15□□□□□ -0.01
NCKAP1LP55160 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15□□□□□ -0.01
NCKAP1LP55160 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NCKAP1LP55160 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC15□□□□□ -0.01
NCKAP1LP55160 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCKAP1LP55160 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NCKAP1LP55160 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.99□□□□□ -0.01
NCKAP1LP55160 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCKAP1LP55160 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.99□□□□□ -0.01
NCKAP1LP55160 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms