Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.09□□□□□ -0.31
CLK1P49759 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.09□□□□□ -0.31
CLK1P49759 KLF2P1-201ENST00000447438 1042 ntBASIC13.09□□□□□ -0.31
CLK1P49759 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLK1P49759 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
CLK1P49759 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.09□□□□□ -0.31
CLK1P49759 RN7SL163P-201ENST00000583100 276 ntBASIC13.09□□□□□ -0.31
CLK1P49759 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.09□□□□□ -0.31
CLK1P49759 BNIP3P13-201ENST00000599968 566 ntBASIC13.09□□□□□ -0.31
CLK1P49759 AC007663.3-201ENST00000609632 465 ntBASIC13.09□□□□□ -0.31
CLK1P49759 AC091271.1-201ENST00000611877 1162 ntBASIC13.09□□□□□ -0.31
CLK1P49759 PCDHB19P-202ENST00000625133 2914 ntBASIC13.09□□□□□ -0.31
CLK1P49759 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.09□□□□□ -0.31
CLK1P49759 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.09□□□□□ -0.31
CLK1P49759 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLK1P49759 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLK1P49759 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.09□□□□□ -0.31
CLK1P49759 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLK1P49759 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AC102953.2-201ENST00000609755 3026 ntBASIC13.09□□□□□ -0.31
CLK1P49759 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLK1P49759 AL445250.1-201ENST00000641671 2259 ntBASIC13.09□□□□□ -0.31
CLK1P49759 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLK1P49759 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLK1P49759 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLK1P49759 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLK1P49759 AC015819.3-201ENST00000624305 2674 ntBASIC13.08□□□□□ -0.31
CLK1P49759 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 BRWD1P1-201ENST00000401091 371 ntBASIC13.08□□□□□ -0.32
CLK1P49759 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.08□□□□□ -0.32
CLK1P49759 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.08□□□□□ -0.32
CLK1P49759 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 AL591471.1-201ENST00000621855 229 ntBASIC13.08□□□□□ -0.32
CLK1P49759 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 LAP3P2-201ENST00000454686 1454 ntBASIC13.08□□□□□ -0.32
CLK1P49759 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 AC010970.1-201ENST00000445125 1848 ntBASIC13.08□□□□□ -0.32
CLK1P49759 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLK1P49759 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLK1P49759 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CLK1P49759 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLK1P49759 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLK1P49759 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLK1P49759 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms