Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TNNI2P48788 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.27■□□□□ 0.2
TNNI2P48788 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.27■□□□□ 0.2
TNNI2P48788 AC090643.2-201ENST00000623442 2029 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 AL157996.1-201ENST00000624684 2299 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.27■□□□□ 0.19
TNNI2P48788 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 FAM226B-201ENST00000602508 1490 ntBASIC16.27■□□□□ 0.19
TNNI2P48788 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.27■□□□□ 0.19
TNNI2P48788 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.27■□□□□ 0.19
TNNI2P48788 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNNI2P48788 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TNNI2P48788 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TNNI2P48788 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 RPL18AP16-201ENST00000424057 531 ntBASIC16.26■□□□□ 0.19
TNNI2P48788 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.26■□□□□ 0.19
TNNI2P48788 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.26■□□□□ 0.19
TNNI2P48788 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.26■□□□□ 0.19
TNNI2P48788 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 AL928921.2-201ENST00000641325 2442 ntBASIC16.26■□□□□ 0.19
TNNI2P48788 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNNI2P48788 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 AC089987.1-201ENST00000551654 2209 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TNNI2P48788 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.25■□□□□ 0.19
TNNI2P48788 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.25■□□□□ 0.19
TNNI2P48788 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.25■□□□□ 0.19
TNNI2P48788 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.25■□□□□ 0.19
TNNI2P48788 AC132812.1-201ENST00000583145 892 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 PRMT1P1-201ENST00000604252 1009 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 BX322534.1-201ENST00000635574 241 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 AC215524.1-201ENST00000635696 241 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 FMO6P-201ENST00000236166 1620 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNNI2P48788 AC008536.3-201ENST00000623282 1599 ntBASIC16.25■□□□□ 0.19
TNNI2P48788 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.25■□□□□ 0.19
TNNI2P48788 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.25■□□□□ 0.19
TNNI2P48788 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNNI2P48788 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms