Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 RIBC1-204ENST00000457095 1949 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 CHURC1-FNTB-201ENST00000549987 1468 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 SLC17A8-202ENST00000392989 1737 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 SLC35F4-201ENST00000339762 1779 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 AC135506.1-201ENST00000603877 1799 ntBASIC8.72□□□□□ -1.01
PCP4P48539 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC8.72□□□□□ -1.01
PCP4P48539 MIR3180-1-201ENST00000580374 94 ntBASIC8.72□□□□□ -1.01
PCP4P48539 MIR3180-3-201ENST00000584616 94 ntBASIC8.72□□□□□ -1.01
PCP4P48539 AC007029.1-201ENST00000604183 313 ntBASIC8.72□□□□□ -1.01
PCP4P48539 AL353801.3-201ENST00000609898 542 ntBASIC8.72□□□□□ -1.01
PCP4P48539 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC8.72□□□□□ -1.01
PCP4P48539 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 AL662907.2-201ENST00000624339 3448 ntBASIC8.72□□□□□ -1.01
PCP4P48539 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 AC026362.2-201ENST00000624878 5566 ntBASIC8.72□□□□□ -1.01
PCP4P48539 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PCP4P48539 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 SEMA3F-AS1-202ENST00000437204 2755 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 AC037471.1-201ENST00000554586 1699 ntBASIC8.72□□□□□ -1.01
PCP4P48539 AC127381.2-201ENST00000560680 1699 ntBASIC8.72□□□□□ -1.01
PCP4P48539 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC8.72□□□□□ -1.01
PCP4P48539 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PCP4P48539 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 AP003784.1-201ENST00000622964 1749 ntBASIC8.71□□□□□ -1.01
PCP4P48539 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC8.71□□□□□ -1.01
PCP4P48539 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC8.71□□□□□ -1.01
PCP4P48539 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 GOLGA6B-201ENST00000421285 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC8.71□□□□□ -1.01
PCP4P48539 OGDHL-203ENST00000432695 3383 ntTSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC8.71□□□□□ -1.01
PCP4P48539 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC8.71□□□□□ -1.01
PCP4P48539 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PCP4P48539 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PCP4P48539 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms