Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 AC015802.1-201ENST00000588104 1449 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 AL008638.4-201ENST00000624792 1315 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 AC087386.2-201ENST00000623212 4637 ntBASIC14.38□□□□□ -0.11
MTHFRP42898 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MTHFRP42898 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.38□□□□□ -0.11
MTHFRP42898 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.38□□□□□ -0.11
MTHFRP42898 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 GRAMD4P6-201ENST00000556999 244 ntBASIC14.38□□□□□ -0.11
MTHFRP42898 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 AL591424.3-201ENST00000614278 872 ntBASIC14.38□□□□□ -0.11
MTHFRP42898 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.38□□□□□ -0.11
MTHFRP42898 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 AL359881.3-201ENST00000602640 1721 ntBASIC14.38□□□□□ -0.11
MTHFRP42898 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.38□□□□□ -0.11
MTHFRP42898 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MTHFRP42898 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MTHFRP42898 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MTHFRP42898 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.37□□□□□ -0.11
MTHFRP42898 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.37□□□□□ -0.11
MTHFRP42898 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.37□□□□□ -0.11
MTHFRP42898 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.37□□□□□ -0.11
MTHFRP42898 RN7SL480P-201ENST00000581481 294 ntBASIC14.37□□□□□ -0.11
MTHFRP42898 AC080013.5-201ENST00000607044 679 ntBASIC14.37□□□□□ -0.11
MTHFRP42898 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 AC020922.4-201ENST00000621389 339 ntBASIC14.37□□□□□ -0.11
MTHFRP42898 AC010531.8-201ENST00000623341 685 ntBASIC14.37□□□□□ -0.11
MTHFRP42898 BX322534.1-201ENST00000635574 241 ntBASIC14.37□□□□□ -0.11
MTHFRP42898 AC215524.1-201ENST00000635696 241 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms