Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 BX679664.3-201ENST00000414070 555 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CYP46A4P-201ENST00000414953 267 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 GPAA1P2-201ENST00000417923 928 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 AL596276.2-201ENST00000447525 331 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 AC113935.1-201ENST00000471722 555 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 AC020907.1-201ENST00000616460 1350 ntBASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AKR7A2P1-201ENST00000460134 915 ntBASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF767P-206ENST00000513792 565 ntBASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 POU5F1P2-201ENST00000521750 823 ntBASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL805961.2-201ENST00000642139 4817 ntBASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HLA-DRB4X5D2U9 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms