Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 AC108024.1-201ENST00000626286 1721 ntBASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC5Q9UQL6 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AC004837.1-201ENST00000446267 564 ntBASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 SAA2-206ENST00000530400 323 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 CSTP2-201ENST00000610599 398 ntBASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AC105137.3-201ENST00000617588 984 ntBASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC5Q9UQL6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC005840.4-201ENST00000541242 2494 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 FUCA1P1-201ENST00000374476 1351 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 MANEA-AS1-201ENST00000564541 2268 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 BAK1P1-201ENST00000317045 636 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 GULOP-201ENST00000454030 748 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC008026.2-201ENST00000495438 348 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 RN7SL556P-201ENST00000582856 298 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CICP20-201ENST00000443330 2801 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC024075.2-201ENST00000598112 1473 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 AC021305.1-201ENST00000520656 1514 ntBASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC5Q9UQL6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC5Q9UQL6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC5Q9UQL6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms