Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC019193.1-201ENST00000506678 823 ntBASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AC145285.5-201ENST00000562217 361 ntBASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AC132825.4-202ENST00000578792 434 ntBASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AC084346.2-201ENST00000607097 949 ntBASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 FMO6P-201ENST00000236166 1620 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AL512306.1-201ENST00000432698 848 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC018638.5-201ENST00000450885 754 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC103810.10-201ENST00000606504 343 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC009145.4-201ENST00000625119 1294 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC093462.1-201ENST00000621167 1683 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AC006372.4-201ENST00000624122 1543 ntBASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPARGC1AQ9UBK2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AL118506.1-201ENST00000601296 3082 ntBASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AC026316.1-201ENST00000398900 414 ntBASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 EEF1DP6-201ENST00000449232 372 ntBASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 RN7SL81P-201ENST00000493781 261 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms