Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 PPT1-213ENST00000641319 2388 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 TEKT4P2-202ENST00000559466 1312 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AL583805.1-201ENST00000391389 531 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 MIR3940-201ENST00000579148 102 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AC007326.1-201ENST00000604539 458 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AC009560.1-201ENST00000620208 434 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AL355102.3-201ENST00000554299 1678 ntBASIC14.25□□□□□ -0.13
HDAC11Q96DB2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDAC11Q96DB2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PES1P2-201ENST00000449745 1735 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC099521.3-201ENST00000624251 2938 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 FTH1P22-201ENST00000456305 520 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC145285.5-201ENST00000562217 361 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SIGLEC22P-201ENST00000599104 714 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AC009145.4-201ENST00000625119 1294 ntBASIC14.24□□□□□ -0.13
HDAC11Q96DB2 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.24□□□□□ -0.13
HDAC11Q96DB2 AL139099.5-201ENST00000635274 300 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms