Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 MIR5572-201ENST00000583188 137 ntBASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RN7SL555P-201ENST00000584742 339 ntBASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AC018635.2-201ENST00000608625 364 ntBASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.23
TRIM48Q8IWZ4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.65□□□□□ -0.23
TRIM48Q8IWZ4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
TRIM48Q8IWZ4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 RCC2P1-201ENST00000452257 1476 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 DPY19L2P5-201ENST00000456300 331 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AC018463.1-201ENST00000456674 917 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 RN7SL564P-201ENST00000496309 250 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 COQ10BP2-201ENST00000513804 724 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CR383656.3-201ENST00000551315 183 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 DNM1P30-201ENST00000563586 452 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 U62317.3-201ENST00000608319 855 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 ODCP-201ENST00000459650 1639 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AC138761.6-201ENST00000583997 1423 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 AL157996.1-201ENST00000624684 2299 ntBASIC13.64□□□□□ -0.23
TRIM48Q8IWZ4 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms