Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PGAM1P11-201ENST00000416729 680 ntBASIC14.69□□□□□ -0.06
RNF135Q8IUD6 CDCA4P4-201ENST00000435216 680 ntBASIC14.69□□□□□ -0.06
RNF135Q8IUD6 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.69□□□□□ -0.06
RNF135Q8IUD6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.69□□□□□ -0.06
RNF135Q8IUD6 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 MIR4254-201ENST00000581063 76 ntBASIC14.69□□□□□ -0.06
RNF135Q8IUD6 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AP000244.1-201ENST00000424582 201 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 PSAT1P2-201ENST00000426107 972 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 NRADDP-201ENST00000437305 691 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AC010900.1-201ENST00000449849 1296 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 RPS18P9-201ENST00000482817 460 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 RN7SL718P-201ENST00000581254 303 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 MST1P2-201ENST00000457982 2291 ntBASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms