Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 MIR4265-201ENST00000582152 99 ntBASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 AC007881.3-201ENST00000608897 607 ntBASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 CR392039.2-201ENST00000623182 509 ntBASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 MKRN5P-201ENST00000445263 1467 ntBASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.43□□□□□ -0.1
TTC39BQ5VTQ0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AP002803.1-201ENST00000528836 498 ntBASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 NUDT4P2-201ENST00000578341 546 ntBASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 RN7SL190P-201ENST00000582519 257 ntBASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AP000322.3-201ENST00000608665 388 ntBASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TTC39BQ5VTQ0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC138761.6-201ENST00000583997 1423 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 ABCD1P2-201ENST00000429313 1601 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC078991.1-201ENST00000437297 610 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC098935.1-201ENST00000446057 611 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms