Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 AC092638.2-201ENST00000441105 947 ntBASIC13.15□□□□□ -0.3
SKP1P63208 KRT18P62-201ENST00000446618 1287 ntBASIC13.15□□□□□ -0.3
SKP1P63208 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.15□□□□□ -0.3
SKP1P63208 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.15□□□□□ -0.3
SKP1P63208 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.15□□□□□ -0.3
SKP1P63208 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.15□□□□□ -0.3
SKP1P63208 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.15□□□□□ -0.3
SKP1P63208 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.15□□□□□ -0.3
SKP1P63208 RN7SL470P-201ENST00000583069 259 ntBASIC13.15□□□□□ -0.3
SKP1P63208 AC138894.2-201ENST00000602838 371 ntBASIC13.15□□□□□ -0.3
SKP1P63208 AC242376.2-201ENST00000619355 883 ntBASIC13.15□□□□□ -0.3
SKP1P63208 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.15□□□□□ -0.3
SKP1P63208 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 AC015909.5-201ENST00000624336 2266 ntBASIC13.15□□□□□ -0.3
SKP1P63208 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.15□□□□□ -0.3
SKP1P63208 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
SKP1P63208 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SKP1P63208 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SKP1P63208 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SKP1P63208 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 Z69890.1-201ENST00000382990 339 ntBASIC13.14□□□□□ -0.31
SKP1P63208 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 ACTBP14-201ENST00000411655 1089 ntBASIC13.14□□□□□ -0.31
SKP1P63208 RPL3P2-204ENST00000413027 1203 ntBASIC13.14□□□□□ -0.31
SKP1P63208 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 EEF1DP2-201ENST00000433698 843 ntBASIC13.14□□□□□ -0.31
SKP1P63208 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 AL354861.1-201ENST00000445213 355 ntBASIC13.14□□□□□ -0.31
SKP1P63208 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 AC095040.1-201ENST00000513286 675 ntBASIC13.14□□□□□ -0.31
SKP1P63208 RN7SKP155-201ENST00000516031 288 ntBASIC13.14□□□□□ -0.31
SKP1P63208 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.14□□□□□ -0.31
SKP1P63208 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.14□□□□□ -0.31
SKP1P63208 AC007881.3-201ENST00000608897 607 ntBASIC13.14□□□□□ -0.31
SKP1P63208 AC007250.1-201ENST00000608934 338 ntBASIC13.14□□□□□ -0.31
SKP1P63208 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 AC072061.1-201ENST00000569710 2234 ntBASIC13.14□□□□□ -0.31
SKP1P63208 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.14□□□□□ -0.31
SKP1P63208 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.14□□□□□ -0.31
SKP1P63208 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 AL137784.3-201ENST00000623858 2288 ntBASIC13.14□□□□□ -0.31
SKP1P63208 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SKP1P63208 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms