Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 AP006294.1-201ENST00000415407 339 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 RGS5-214ENST00000429865 754 ntTSL 3 BASIC9.4□□□□□ -0.9
CXCL5P42830 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC9.4□□□□□ -0.9
CXCL5P42830 AC012441.2-201ENST00000444843 739 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 AL590640.2-201ENST00000457038 527 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC9.4□□□□□ -0.9
CXCL5P42830 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC9.4□□□□□ -0.9
CXCL5P42830 NCK2-206ENST00000522586 490 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 GNRHR2-203ENST00000581100 1187 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC9.4□□□□□ -0.9
CXCL5P42830 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
CXCL5P42830 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.4□□□□□ -0.9
CXCL5P42830 AC133540.1-201ENST00000620845 1019 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 AL591163.1-201ENST00000641757 987 ntBASIC9.4□□□□□ -0.9
CXCL5P42830 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC9.4□□□□□ -0.9
CXCL5P42830 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CXCL5P42830 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 AC004623.1-201ENST00000624592 2127 ntBASIC9.4□□□□□ -0.91
CXCL5P42830 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC9.4□□□□□ -0.91
CXCL5P42830 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 ZNF493-208ENST00000599461 1769 ntBASIC9.4□□□□□ -0.91
CXCL5P42830 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
CXCL5P42830 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CXCL5P42830 AC112176.1-201ENST00000565428 3024 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC9.39□□□□□ -0.91
CXCL5P42830 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CXCL5P42830 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 HLA-V-201ENST00000429037 534 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC016694.1-201ENST00000434179 700 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 AC002472.2-201ENST00000442739 958 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC007389.4-201ENST00000454674 793 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
CXCL5P42830 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 RFPL4AP1-201ENST00000530883 850 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC9.39□□□□□ -0.91
CXCL5P42830 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms