Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 ABCD1P3-201ENST00000562927 605 ntBASIC18.1■□□□□ 0.49
USP6P35125 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.1■□□□□ 0.49
USP6P35125 AC087072.1-201ENST00000603727 421 ntBASIC18.1■□□□□ 0.49
USP6P35125 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC18.1■□□□□ 0.49
USP6P35125 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
USP6P35125 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC18.09■□□□□ 0.49
USP6P35125 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6P35125 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 CDC37P2-201ENST00000562287 1029 ntBASIC18.09■□□□□ 0.49
USP6P35125 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6P35125 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6P35125 FRG2EP-201ENST00000634243 835 ntBASIC18.09■□□□□ 0.49
USP6P35125 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6P35125 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6P35125 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6P35125 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP6P35125 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6P35125 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 AL391647.1-201ENST00000395664 511 ntBASIC18.08■□□□□ 0.49
USP6P35125 NOS2P3-201ENST00000411468 867 ntBASIC18.08■□□□□ 0.49
USP6P35125 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC18.08■□□□□ 0.49
USP6P35125 NOS2P2-201ENST00000426269 867 ntBASIC18.08■□□□□ 0.49
USP6P35125 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
USP6P35125 AL356000.1-201ENST00000441073 1238 ntBASIC18.08■□□□□ 0.49
USP6P35125 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC18.08■□□□□ 0.49
USP6P35125 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC18.08■□□□□ 0.49
USP6P35125 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC18.08■□□□□ 0.49
USP6P35125 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC18.08■□□□□ 0.49
USP6P35125 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC18.08■□□□□ 0.49
USP6P35125 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC18.08■□□□□ 0.49
USP6P35125 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC18.08■□□□□ 0.49
USP6P35125 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC18.08■□□□□ 0.49
USP6P35125 AL109954.3-201ENST00000615088 558 ntBASIC18.08■□□□□ 0.49
USP6P35125 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.08■□□□□ 0.49
USP6P35125 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6P35125 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 AHCYP7-201ENST00000560847 1308 ntBASIC18.08■□□□□ 0.48
USP6P35125 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6P35125 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
USP6P35125 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms