Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
EPB42P16452 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.52□□□□□ -0.25
EPB42P16452 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.52□□□□□ -0.25
EPB42P16452 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EPB42P16452 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
EPB42P16452 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EPB42P16452 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EPB42P16452 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 NRADDP-202ENST00000641269 1585 ntBASIC13.51□□□□□ -0.25
EPB42P16452 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 BANF1P3-201ENST00000412556 261 ntBASIC13.51□□□□□ -0.25
EPB42P16452 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.51□□□□□ -0.25
EPB42P16452 AL596276.2-201ENST00000447525 331 ntBASIC13.51□□□□□ -0.25
EPB42P16452 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.51□□□□□ -0.25
EPB42P16452 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.51□□□□□ -0.25
EPB42P16452 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.51□□□□□ -0.25
EPB42P16452 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 AC243960.2-201ENST00000600996 747 ntBASIC13.51□□□□□ -0.25
EPB42P16452 AC091544.8-201ENST00000619490 361 ntBASIC13.51□□□□□ -0.25
EPB42P16452 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.51□□□□□ -0.25
EPB42P16452 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EPB42P16452 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 LINC00567-201ENST00000569854 3409 ntBASIC13.51□□□□□ -0.25
EPB42P16452 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
EPB42P16452 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.51□□□□□ -0.25
EPB42P16452 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
EPB42P16452 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.5□□□□□ -0.25
EPB42P16452 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.5□□□□□ -0.25
EPB42P16452 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 TBC1D27-202ENST00000424239 1573 ntBASIC13.5□□□□□ -0.25
EPB42P16452 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.5□□□□□ -0.25
EPB42P16452 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
EPB42P16452 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 FAM86MP-201ENST00000340703 885 ntBASIC13.5□□□□□ -0.25
EPB42P16452 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
EPB42P16452 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.5□□□□□ -0.25
EPB42P16452 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 ISCA2P1-201ENST00000425548 448 ntBASIC13.5□□□□□ -0.25
EPB42P16452 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.5□□□□□ -0.25
EPB42P16452 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
EPB42P16452 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.5□□□□□ -0.25
EPB42P16452 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EPB42P16452 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms