Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 RCC2P1-201ENST00000452257 1476 ntBASIC12.35□□□□□ -0.43
APOA1P02647 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PKP4P1-201ENST00000426801 2158 ntBASIC12.35□□□□□ -0.43
APOA1P02647 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 SNORA50C-201ENST00000408535 133 ntBASIC12.35□□□□□ -0.43
APOA1P02647 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.35□□□□□ -0.43
APOA1P02647 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 KRT18P15-201ENST00000458108 1291 ntBASIC12.35□□□□□ -0.43
APOA1P02647 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 KRT18P58-201ENST00000527480 1120 ntBASIC12.35□□□□□ -0.43
APOA1P02647 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.35□□□□□ -0.43
APOA1P02647 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.35□□□□□ -0.43
APOA1P02647 SNORA50.1-201ENST00000628590 135 ntBASIC12.35□□□□□ -0.43
APOA1P02647 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.35□□□□□ -0.43
APOA1P02647 CCT7P1-201ENST00000406551 1611 ntBASIC12.35□□□□□ -0.43
APOA1P02647 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 AC020917.4-201ENST00000623994 1999 ntBASIC12.35□□□□□ -0.43
APOA1P02647 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 DBIL5P-203ENST00000536214 2677 ntBASIC12.35□□□□□ -0.43
APOA1P02647 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
APOA1P02647 AC009549.1-201ENST00000603468 1686 ntBASIC12.35□□□□□ -0.43
APOA1P02647 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 FKBP4P6-201ENST00000457486 1332 ntBASIC12.35□□□□□ -0.43
APOA1P02647 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOA1P02647 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.35□□□□□ -0.43
APOA1P02647 EGLN3-205ENST00000547327 2849 ntBASIC12.34□□□□□ -0.43
APOA1P02647 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOA1P02647 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOA1P02647 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.34□□□□□ -0.43
APOA1P02647 CNN2P2-201ENST00000443536 909 ntBASIC12.34□□□□□ -0.43
APOA1P02647 CNN2P3-201ENST00000450201 906 ntBASIC12.34□□□□□ -0.43
APOA1P02647 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.34□□□□□ -0.43
APOA1P02647 AC068587.3-201ENST00000526613 355 ntBASIC12.34□□□□□ -0.43
APOA1P02647 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms