Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 AL512430.1-201ENST00000392575 860 ntBASIC12.38□□□□□ -0.43
CNOT4O95628 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.38□□□□□ -0.43
CNOT4O95628 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.38□□□□□ -0.43
CNOT4O95628 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CNOT4O95628 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.38□□□□□ -0.43
CNOT4O95628 AP005264.5-201ENST00000590066 467 ntBASIC12.38□□□□□ -0.43
CNOT4O95628 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 AL139424.3-202ENST00000641619 917 ntBASIC12.38□□□□□ -0.43
CNOT4O95628 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.38□□□□□ -0.43
CNOT4O95628 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 KRT8P43-201ENST00000406052 1458 ntBASIC12.38□□□□□ -0.43
CNOT4O95628 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 AL627389.1-201ENST00000413508 1182 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 GRPEL2P1-201ENST00000453145 339 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 MRPL22P1-201ENST00000505398 616 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 OR5BD1P-201ENST00000532527 817 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.37□□□□□ -0.43
CNOT4O95628 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.37□□□□□ -0.43
CNOT4O95628 SNORD3B-1-201ENST00000577988 758 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 MIR4649-201ENST00000582839 64 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 TBC1D27-202ENST00000424239 1573 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 AC068760.1-201ENST00000493579 1953 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms