Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC002350.2-201ENST00000623894 1828 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.57□□□□□ -0.72
VGLL1Q99990 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 COX5BP8-201ENST00000416911 349 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC10.57□□□□□ -0.72
VGLL1Q99990 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 CROCCP4-201ENST00000457096 498 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.57□□□□□ -0.72
VGLL1Q99990 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC023310.1-201ENST00000554836 735 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC018629.1-201ENST00000623381 1736 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 RPL13AP3-202ENST00000494676 1473 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 CALY-203ENST00000368558 825 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.56□□□□□ -0.72
VGLL1Q99990 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VGLL1Q99990 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC079178.1-201ENST00000420915 656 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC244157.2-201ENST00000616239 1006 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 AC092299.1-201ENST00000632679 757 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VGLL1Q99990 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 LINC01815-202ENST00000641468 1409 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 CICP1-201ENST00000416803 2410 ntBASIC10.56□□□□□ -0.72
VGLL1Q99990 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms