Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AC009779.7-201ENST00000609031 469 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AP000553.2-201ENST00000609038 441 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AL445250.1-201ENST00000641671 2259 ntBASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 TLE2-205ENST00000586422 389 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 FAM223B-202ENST00000598177 713 ntBASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MDC1-209ENST00000613547 830 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 FAM223A-202ENST00000625204 713 ntBASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBGCP6Q96RT7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 MIR766-201ENST00000390223 111 ntBASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 AP000346.2-202ENST00000425948 383 ntBASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 MIR5193-201ENST00000584510 109 ntBASIC17.08■□□□□ 0.33
TUBGCP6Q96RT7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 AC020917.4-201ENST00000623994 1999 ntBASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 AC104758.3-203ENST00000562938 2123 ntBASIC17.08■□□□□ 0.32
TUBGCP6Q96RT7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC007622.1-201ENST00000488371 535 ntBASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AL033381.2-201ENST00000603854 732 ntBASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC010601.2-201ENST00000623060 774 ntBASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC099795.2-201ENST00000639582 440 ntBASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBGCP6Q96RT7 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms