Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 PGK1P2-201ENST00000431702 1214 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 ACTG1P23-201ENST00000437653 1074 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AC103724.2-201ENST00000520355 476 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AL031058.1-201ENST00000561592 888 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AC122134.1-202ENST00000569111 1201 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 FAM187B2P-201ENST00000577135 713 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 GRK6P1-201ENST00000400595 1711 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 AC092115.1-201ENST00000566277 1402 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRCH3Q96II8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 LINC00115-201ENST00000473798 1317 ntBASIC14.91□□□□□ -0.02
LRCH3Q96II8 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC14.91□□□□□ -0.02
LRCH3Q96II8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 IQCF4-203ENST00000428561 420 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AL117351.1-201ENST00000438864 766 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC012066.1-201ENST00000439252 694 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AL078624.1-201ENST00000604004 547 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 INTS4P1-203ENST00000641008 3683 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 MTHFR-210ENST00000641407 2387 ntBASIC14.9□□□□□ -0.02
LRCH3Q96II8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH3Q96II8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRCH3Q96II8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms