Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AC008267.3-201ENST00000448776 712 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 RNF7-205ENST00000480908 782 ntTSL 4 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 RN7SL452P-201ENST00000482923 291 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 HINT1-204ENST00000506908 681 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 FTH1-205ENST00000529631 507 ntTSL 4 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 BOLA3P2-201ENST00000586496 323 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 TNRC18P2-201ENST00000417666 2714 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 FKBP4P1-201ENST00000507284 1347 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 IMPDH1P5-201ENST00000439688 1540 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 WDR54-202ENST00000409791 854 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 PLAC9P1-203ENST00000440031 223 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AACSP1-202ENST00000521412 1095 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 RN7SL300P-201ENST00000582522 318 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 NAT9-219ENST00000582524 573 ntTSL 4 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AL589743.3-201ENST00000604121 517 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC136475.9-201ENST00000605240 497 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 FRG2EP-201ENST00000634243 835 ntBASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 CD9-212ENST00000610354 1315 ntTSL 5 BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RC3H1Q5TC82 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AC152010.1-201ENST00000415779 2006 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms