Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 FKBP4P8-201ENST00000610931 1369 ntBASIC16.17■□□□□ 0.18
IRX3P78415 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
IRX3P78415 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 ACTBP14-201ENST00000411655 1089 ntBASIC16.17■□□□□ 0.18
IRX3P78415 FAM21EP-201ENST00000417804 985 ntBASIC16.17■□□□□ 0.18
IRX3P78415 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 EIF5AP2-201ENST00000585668 1047 ntBASIC16.17■□□□□ 0.18
IRX3P78415 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
IRX3P78415 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
IRX3P78415 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC16.16■□□□□ 0.18
IRX3P78415 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IRX3P78415 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX3P78415 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX3P78415 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX3P78415 RN7SL351P-201ENST00000469306 248 ntBASIC16.16■□□□□ 0.18
IRX3P78415 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX3P78415 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.16■□□□□ 0.18
IRX3P78415 BAK1P2-201ENST00000532665 631 ntBASIC16.16■□□□□ 0.18
IRX3P78415 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX3P78415 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.16■□□□□ 0.18
IRX3P78415 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX3P78415 AL049840.2-201ENST00000602722 535 ntBASIC16.16■□□□□ 0.18
IRX3P78415 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 AC090505.1-201ENST00000430515 1834 ntBASIC16.16■□□□□ 0.18
IRX3P78415 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.16■□□□□ 0.18
IRX3P78415 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IRX3P78415 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IRX3P78415 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms