Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.11■□□□□ 0.49
ZC3H6P61129 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZC3H6P61129 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZC3H6P61129 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 AL356653.1-201ENST00000402743 360 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC18.11■□□□□ 0.49
ZC3H6P61129 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.11■□□□□ 0.49
ZC3H6P61129 CA5BP1-205ENST00000435806 1064 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 SLC25A15P1-201ENST00000456738 342 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC18.11■□□□□ 0.49
ZC3H6P61129 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC18.11■□□□□ 0.49
ZC3H6P61129 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 AC134878.2-201ENST00000620700 1265 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 Z82244.2-201ENST00000632196 448 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 RPL4P6-201ENST00000438116 1304 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 AC034205.3-201ENST00000603595 1376 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC18.11■□□□□ 0.49
ZC3H6P61129 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 AL031590.1-202ENST00000641466 1737 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 MST1P2-201ENST00000457982 2291 ntBASIC18.11■□□□□ 0.49
ZC3H6P61129 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H6P61129 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H6P61129 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZC3H6P61129 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC073869.1-201ENST00000415574 2762 ntBASIC18.1■□□□□ 0.49
ZC3H6P61129 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 TNRC18P2-201ENST00000417666 2714 ntBASIC18.1■□□□□ 0.49
ZC3H6P61129 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 ERG-211ENST00000453032 1595 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 SRP9P1-201ENST00000445874 261 ntBASIC18.1■□□□□ 0.49
ZC3H6P61129 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 NAA38-204ENST00000575208 529 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H6P61129 AC091691.1-201ENST00000583587 1018 ntBASIC18.1■□□□□ 0.49
ZC3H6P61129 AC009812.1-201ENST00000605948 1059 ntBASIC18.1■□□□□ 0.49
ZC3H6P61129 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H6P61129 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H6P61129 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H6P61129 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H6P61129 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.09■□□□□ 0.49
ZC3H6P61129 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H6P61129 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ZC3H6P61129 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC18.09■□□□□ 0.49
ZC3H6P61129 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H6P61129 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H6P61129 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H6P61129 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms