Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.85□□□□□ -0.35
HTR3AP46098 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HTR3AP46098 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
HTR3AP46098 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 AC102953.2-201ENST00000609755 3026 ntBASIC12.85□□□□□ -0.35
HTR3AP46098 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HTR3AP46098 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR3AP46098 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
HTR3AP46098 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
HTR3AP46098 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HTR3AP46098 MIR193BHG-211ENST00000641433 5365 ntBASIC12.84□□□□□ -0.35
HTR3AP46098 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HTR3AP46098 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.84□□□□□ -0.35
HTR3AP46098 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HTR3AP46098 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HTR3AP46098 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 BX679664.3-201ENST00000414070 555 ntBASIC12.84□□□□□ -0.35
HTR3AP46098 RPS9P1-201ENST00000419943 583 ntBASIC12.84□□□□□ -0.35
HTR3AP46098 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR3AP46098 AC113935.1-201ENST00000471722 555 ntBASIC12.84□□□□□ -0.35
HTR3AP46098 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.84□□□□□ -0.35
HTR3AP46098 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.84□□□□□ -0.35
HTR3AP46098 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR3AP46098 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.84□□□□□ -0.35
HTR3AP46098 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HTR3AP46098 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR3AP46098 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR3AP46098 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
HTR3AP46098 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR3AP46098 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.83□□□□□ -0.36
HTR3AP46098 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.83□□□□□ -0.36
HTR3AP46098 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR3AP46098 AGAP12P-201ENST00000585227 2359 ntBASIC12.83□□□□□ -0.36
HTR3AP46098 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HTR3AP46098 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.83□□□□□ -0.36
HTR3AP46098 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
HTR3AP46098 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR3AP46098 BX284668.4-201ENST00000453917 508 ntBASIC12.83□□□□□ -0.36
HTR3AP46098 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 AKR7A2P1-201ENST00000460134 915 ntBASIC12.83□□□□□ -0.36
HTR3AP46098 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
HTR3AP46098 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR3AP46098 MIR4538-201ENST00000581377 78 ntBASIC12.83□□□□□ -0.36
HTR3AP46098 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR3AP46098 NDUFV2P1-201ENST00000596415 907 ntBASIC12.83□□□□□ -0.36
HTR3AP46098 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.83□□□□□ -0.36
HTR3AP46098 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
HTR3AP46098 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR3AP46098 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms