Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.7□□□□□ -0.22
SOX11P35716 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.7□□□□□ -0.22
SOX11P35716 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.7□□□□□ -0.22
SOX11P35716 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.7□□□□□ -0.22
SOX11P35716 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SOX11P35716 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SOX11P35716 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SOX11P35716 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SOX11P35716 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 AL445250.1-201ENST00000641671 2259 ntBASIC13.69□□□□□ -0.22
SOX11P35716 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SOX11P35716 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SOX11P35716 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SOX11P35716 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.69□□□□□ -0.22
SOX11P35716 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.69□□□□□ -0.22
SOX11P35716 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.69□□□□□ -0.22
SOX11P35716 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 AP000346.4-201ENST00000614827 381 ntBASIC13.69□□□□□ -0.22
SOX11P35716 AC091544.8-201ENST00000619490 361 ntBASIC13.69□□□□□ -0.22
SOX11P35716 AC091812.3-201ENST00000621362 345 ntBASIC13.69□□□□□ -0.22
SOX11P35716 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SOX11P35716 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.69□□□□□ -0.22
SOX11P35716 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SOX11P35716 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SOX11P35716 AC022400.8-201ENST00000623453 3599 ntBASIC13.68□□□□□ -0.22
SOX11P35716 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 BEND3P3-201ENST00000611030 2440 ntBASIC13.68□□□□□ -0.22
SOX11P35716 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SOX11P35716 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SOX11P35716 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.68□□□□□ -0.22
SOX11P35716 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 PUDPP3-201ENST00000445368 636 ntBASIC13.68□□□□□ -0.22
SOX11P35716 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SOX11P35716 RPL18P13-201ENST00000478088 569 ntBASIC13.68□□□□□ -0.22
SOX11P35716 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 AC090164.2-201ENST00000611487 516 ntBASIC13.68□□□□□ -0.22
SOX11P35716 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 AL136295.7-201ENST00000619226 1200 ntBASIC13.68□□□□□ -0.22
SOX11P35716 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.68□□□□□ -0.22
SOX11P35716 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 KRT8P28-201ENST00000433288 1390 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms