Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.32□□□□□ -0.12
CD48P09326 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD48P09326 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CD48P09326 TBC1D3J-201ENST00000620719 1426 ntBASIC14.32□□□□□ -0.12
CD48P09326 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 AC060814.4-201ENST00000594169 2163 ntBASIC14.32□□□□□ -0.12
CD48P09326 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.31□□□□□ -0.12
CD48P09326 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.31□□□□□ -0.12
CD48P09326 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.31□□□□□ -0.12
CD48P09326 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 AC012044.1-201ENST00000603431 297 ntBASIC14.31□□□□□ -0.12
CD48P09326 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.31□□□□□ -0.12
CD48P09326 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD48P09326 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD48P09326 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD48P09326 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.3□□□□□ -0.12
CD48P09326 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 GGTLC4P-201ENST00000402176 664 ntBASIC14.3□□□□□ -0.12
CD48P09326 TUBB2BP1-201ENST00000404155 871 ntBASIC14.3□□□□□ -0.12
CD48P09326 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 AC092573.1-201ENST00000433054 884 ntBASIC14.3□□□□□ -0.12
CD48P09326 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.3□□□□□ -0.12
CD48P09326 NDUFS6P1-201ENST00000485187 316 ntBASIC14.3□□□□□ -0.12
CD48P09326 COQ10BP2-201ENST00000513804 724 ntBASIC14.3□□□□□ -0.12
CD48P09326 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.3□□□□□ -0.12
CD48P09326 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.3□□□□□ -0.12
CD48P09326 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.3□□□□□ -0.12
CD48P09326 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.3□□□□□ -0.12
CD48P09326 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.3□□□□□ -0.12
CD48P09326 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 CICP9-201ENST00000444451 1913 ntBASIC14.3□□□□□ -0.12
CD48P09326 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD48P09326 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.3□□□□□ -0.12
CD48P09326 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.3□□□□□ -0.12
CD48P09326 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms