Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.79□□□□□ -0.36
THBS1P07996 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
THBS1P07996 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.79□□□□□ -0.36
THBS1P07996 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.79□□□□□ -0.36
THBS1P07996 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
THBS1P07996 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.79□□□□□ -0.36
THBS1P07996 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 AC105148.1-201ENST00000604961 409 ntBASIC12.79□□□□□ -0.36
THBS1P07996 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 MIR6769A-201ENST00000617340 73 ntBASIC12.79□□□□□ -0.36
THBS1P07996 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.79□□□□□ -0.36
THBS1P07996 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 Z98257.2-202ENST00000641138 1548 ntBASIC12.78□□□□□ -0.36
THBS1P07996 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
THBS1P07996 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
THBS1P07996 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.78□□□□□ -0.36
THBS1P07996 TUBB2BP1-201ENST00000404155 871 ntBASIC12.78□□□□□ -0.36
THBS1P07996 HSFY1P1-201ENST00000423928 1178 ntBASIC12.78□□□□□ -0.36
THBS1P07996 ISCA2P1-201ENST00000425548 448 ntBASIC12.78□□□□□ -0.36
THBS1P07996 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 AC098934.1-203ENST00000442868 1262 ntBASIC12.78□□□□□ -0.36
THBS1P07996 RPSAP15-201ENST00000448168 861 ntBASIC12.78□□□□□ -0.36
THBS1P07996 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.78□□□□□ -0.36
THBS1P07996 RN7SL769P-201ENST00000469386 295 ntBASIC12.78□□□□□ -0.36
THBS1P07996 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 AC114947.1-202ENST00000514136 344 ntBASIC12.78□□□□□ -0.36
THBS1P07996 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 PHBP15-201ENST00000574228 665 ntBASIC12.78□□□□□ -0.36
THBS1P07996 RN7SL190P-201ENST00000582519 257 ntBASIC12.78□□□□□ -0.36
THBS1P07996 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
THBS1P07996 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.78□□□□□ -0.36
THBS1P07996 LINC01783-202ENST00000614408 828 ntBASIC12.78□□□□□ -0.36
THBS1P07996 BX284668.2-205ENST00000619677 828 ntBASIC12.78□□□□□ -0.36
THBS1P07996 AC027281.2-201ENST00000623856 713 ntBASIC12.78□□□□□ -0.36
THBS1P07996 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.78□□□□□ -0.36
THBS1P07996 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
THBS1P07996 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms