Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHL1O00533 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHL1O00533 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHL1O00533 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 OR2I1P-210ENST00000642037 4691 ntBASIC17.49■□□□□ 0.39
CHL1O00533 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 AC091807.1-201ENST00000418838 1544 ntBASIC17.49■□□□□ 0.39
CHL1O00533 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHL1O00533 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CHL1O00533 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 MTHFD2P7-201ENST00000483867 983 ntBASIC17.49■□□□□ 0.39
CHL1O00533 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 URAHP-205ENST00000610227 398 ntBASIC17.49■□□□□ 0.39
CHL1O00533 MIR6756-201ENST00000616240 63 ntBASIC17.49■□□□□ 0.39
CHL1O00533 FO393412.1-201ENST00000619841 382 ntBASIC17.49■□□□□ 0.39
CHL1O00533 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 AC064850.1-201ENST00000413279 1398 ntBASIC17.49■□□□□ 0.39
CHL1O00533 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.49■□□□□ 0.39
CHL1O00533 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 CICP9-201ENST00000444451 1913 ntBASIC17.49■□□□□ 0.39
CHL1O00533 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHL1O00533 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHL1O00533 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHL1O00533 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.48■□□□□ 0.39
CHL1O00533 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
CHL1O00533 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 AC104961.1-201ENST00000427605 771 ntBASIC17.48■□□□□ 0.39
CHL1O00533 AK2-208ENST00000487289 920 ntTSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 RN7SL147P-201ENST00000487345 298 ntBASIC17.48■□□□□ 0.39
CHL1O00533 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.48■□□□□ 0.39
CHL1O00533 SRPK2P-201ENST00000523408 1100 ntBASIC17.48■□□□□ 0.39
CHL1O00533 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 AL031587.5-201ENST00000624344 1849 ntBASIC17.48■□□□□ 0.39
CHL1O00533 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC17.48■□□□□ 0.39
CHL1O00533 STK16-202ENST00000409260 1493 ntTSL 5 BASIC17.48■□□□□ 0.39
CHL1O00533 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHL1O00533 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHL1O00533 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHL1O00533 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 KRT8P38-201ENST00000441370 1430 ntBASIC17.47■□□□□ 0.39
CHL1O00533 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHL1O00533 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 MPV17-209ENST00000405983 859 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 MIR1301-201ENST00000408518 82 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms