Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC007389.4-201ENST00000454674 793 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 USP32P1-208ENST00000506594 1164 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AP006547.1-201ENST00000563435 692 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 MIR4783-201ENST00000580343 82 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AL022328.1-201ENST00000610050 478 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 TRIM80P-201ENST00000455685 2848 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 CICP9-201ENST00000444451 1913 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 LINC01815-202ENST00000641468 1409 ntBASIC11.86□□□□□ -0.51
TMEM235A6NFC5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.86□□□□□ -0.51
TMEM235A6NFC5 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AL845472.1-202ENST00000624675 4080 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC008764.8-201ENST00000623966 2717 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC006001.1-201ENST00000325130 474 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC236430.1-201ENST00000402231 743 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 RN7SL837P-201ENST00000463010 287 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC100850.1-201ENST00000506768 649 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC015936.2-201ENST00000593177 259 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AL356740.1-201ENST00000602192 1297 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC015967.2-201ENST00000624092 234 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AC006435.4-201ENST00000625037 234 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AL356737.1-201ENST00000634391 234 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AL139424.3-202ENST00000641619 917 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AHCYP4-201ENST00000419201 1315 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 AHCYP2-201ENST00000430630 1300 ntBASIC11.85□□□□□ -0.51
TMEM235A6NFC5 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms