Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AP001972.5-201ENST00000624624 2338 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 PYY2-201ENST00000315776 282 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC093909.3-201ENST00000504783 336 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC140658.4-201ENST00000561990 352 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AC002044.2-201ENST00000624910 970 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 MAPK10-262ENST00000641051 5738 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 AOC4P-203ENST00000566825 2289 ntBASIC13.67□□□□□ -0.22
SATB2Q9UPW6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SATB2Q9UPW6 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC021305.1-201ENST00000520656 1514 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 RPL35P9-201ENST00000446059 350 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC018638.5-201ENST00000450885 754 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 DNM1P51-201ENST00000558149 522 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SORD2P-201ENST00000558556 1069 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC021016.3-201ENST00000608367 477 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC244250.3-201ENST00000620749 366 ntBASIC13.66□□□□□ -0.22
SATB2Q9UPW6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.66□□□□□ -0.22
SATB2Q9UPW6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms