Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AL359845.1-201ENST00000458202 1648 ntBASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 PPP1R2P1-209ENST00000420261 678 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 GPAA1P1-201ENST00000453019 931 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 CDK2AP2P2-201ENST00000478512 367 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AP005901.1-201ENST00000508721 1181 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 RN7SL644P-201ENST00000577919 259 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 PROCA1-204ENST00000439862 1137 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 VDAC1P12-201ENST00000451853 882 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 RPL7AP53-201ENST00000468834 793 ntBASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AK2-206ENST00000480134 811 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 HINT1-204ENST00000506908 681 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 BIN3-210ENST00000522268 321 ntTSL 5 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIMBP3Q9UFD9 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 PKMP1-201ENST00000455804 1523 ntBASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 RNA5SP248-201ENST00000365602 127 ntBASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 CENPP-204ENST00000618653 570 ntTSL 2 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 AC004494.2-201ENST00000623168 830 ntBASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 AJ011931.1-201ENST00000618749 2492 ntBASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIMBP3Q9UFD9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 AGAP7P-201ENST00000582299 2062 ntBASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 AGAP14-201ENST00000624701 2060 ntBASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 TYRL-201ENST00000243152 441 ntBASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 CHCHD4P4-201ENST00000437690 327 ntBASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 AC113208.2-201ENST00000565381 608 ntBASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 TTN-AS1-231ENST00000589434 1066 ntTSL 5 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC20.58■□□□□ 0.89
RIMBP3Q9UFD9 CU638689.3-201ENST00000624266 1031 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms