Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RPSAP36-202ENST00000494591 1261 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 BX324167.2-201ENST00000623717 3316 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 AGGF1P1-201ENST00000509500 2073 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 SHC1P1-201ENST00000425230 1745 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AC022400.8-201ENST00000623453 3599 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AC136604.1-202ENST00000425471 771 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 Z93015.1-201ENST00000451718 390 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 CICP12-201ENST00000455801 843 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AC005730.2-201ENST00000564549 1184 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 BX088702.1-201ENST00000610784 235 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AL096828.3-201ENST00000615354 462 ntBASIC12.3□□□□□ -0.44
DUX4Q9UBX2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DUX4Q9UBX2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms