Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
VGLL1Q99990 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 MARK2P16-201ENST00000605714 1723 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 GZMB-202ENST00000382540 816 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
VGLL1Q99990 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.58□□□□□ -0.72
VGLL1Q99990 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AC026954.1-201ENST00000429771 1293 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 RPL7P3-201ENST00000441388 714 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 KRT17P7-201ENST00000451704 1104 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 GOLGA2P8-201ENST00000505201 779 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.58□□□□□ -0.72
VGLL1Q99990 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 AP005018.1-201ENST00000525475 301 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC10.58□□□□□ -0.72
VGLL1Q99990 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.58□□□□□ -0.72
VGLL1Q99990 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.58□□□□□ -0.72
VGLL1Q99990 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
VGLL1Q99990 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 GHET1-201ENST00000627071 1906 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 AHCYP4-201ENST00000419201 1315 ntBASIC10.58□□□□□ -0.72
VGLL1Q99990 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VGLL1Q99990 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 ZNF493-208ENST00000599461 1769 ntBASIC10.57□□□□□ -0.72
VGLL1Q99990 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.57□□□□□ -0.72
VGLL1Q99990 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC10.57□□□□□ -0.72
VGLL1Q99990 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VGLL1Q99990 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms