Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MTND1P8-201ENST00000571424 950 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 AC010328.2-201ENST00000597698 1111 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 BNIP3P35-201ENST00000604530 490 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 AC008687.7-202ENST00000637404 953 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 AL158070.2-201ENST00000623713 1621 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 UBTFL8-201ENST00000426903 2112 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.9□□□□□ -0.34
HPS1Q92902 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 AC124319.4-201ENST00000622931 2161 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 AL133338.1-201ENST00000565695 1517 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 LRRC59-203ENST00000576448 1531 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 AC027020.2-201ENST00000602585 2389 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 AL139094.1-201ENST00000405549 1188 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.9□□□□□ -0.34
HPS1Q92902 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.9□□□□□ -0.34
HPS1Q92902 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 PRSS30P-206ENST00000641773 873 ntBASIC12.9□□□□□ -0.34
HPS1Q92902 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.9□□□□□ -0.34
HPS1Q92902 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
HPS1Q92902 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HPS1Q92902 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
HPS1Q92902 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.9□□□□□ -0.35
HPS1Q92902 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.9□□□□□ -0.35
HPS1Q92902 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.9□□□□□ -0.35
HPS1Q92902 PTPRVP-205ENST00000641549 5067 ntBASIC12.9□□□□□ -0.35
HPS1Q92902 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
HPS1Q92902 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.89□□□□□ -0.35
HPS1Q92902 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HPS1Q92902 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.89□□□□□ -0.35
HPS1Q92902 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms