Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SNORA50C-201ENST00000408535 133 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AC124068.2-201ENST00000569473 1109 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AL359881.2-201ENST00000602973 570 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AL022323.5-201ENST00000624101 2059 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SNORA50.1-201ENST00000628590 135 ntBASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 AC073957.3-201ENST00000609998 6758 ntBASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 AC103592.1-201ENST00000394513 664 ntBASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 POM121L10P-201ENST00000436994 1285 ntBASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTN4IP1Q8WWV3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms