Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 ACP1-207ENST00000439645 605 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC069421.1-201ENST00000447462 323 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC138430.2-201ENST00000624068 504 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CYP2B7P-201ENST00000541697 1476 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 DIS3L2P1-201ENST00000509197 559 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 IGHVII-33-1-201ENST00000524010 280 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 MIR4539-201ENST00000579784 60 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 MDC1-209ENST00000613547 830 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 TEDDM2P-201ENST00000414169 786 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC005336.1-201ENST00000585431 1243 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 AC092535.4-201ENST00000609548 397 ntBASIC11.01□□□□□ -0.65
VPS13CQ709C8 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13CQ709C8 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13CQ709C8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 AC020917.4-201ENST00000623994 1999 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 CACYBPP3-201ENST00000406011 625 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 MTHFD2P7-201ENST00000483867 983 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 FP325317.1-201ENST00000539936 1042 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC11□□□□□ -0.65
VPS13CQ709C8 MIR4526-201ENST00000583168 87 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 AC023830.3-201ENST00000612995 1455 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC11□□□□□ -0.65
VPS13CQ709C8 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
VPS13CQ709C8 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
VPS13CQ709C8 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 AC063924.1-201ENST00000546680 673 ntBASIC11□□□□□ -0.65
VPS13CQ709C8 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC11□□□□□ -0.65
VPS13CQ709C8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
VPS13CQ709C8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13CQ709C8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13CQ709C8 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms