Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 AC020917.4-201ENST00000623994 1999 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 ZDHHC8P1-202ENST00000418264 1403 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC010677.1-201ENST00000441690 412 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC053503.3-201ENST00000448375 114 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 RN7SL677P-201ENST00000466970 319 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 RN7SL479P-201ENST00000472003 300 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 GOLGA2P10-201ENST00000550961 817 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 AC245369.8-201ENST00000636589 306 ntBASIC16.96■□□□□ 0.31
RC3H1Q5TC82 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RC3H1Q5TC82 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RC3H1Q5TC82 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AC106872.9-201ENST00000512437 1393 ntBASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 RN7SL33P-201ENST00000462543 342 ntBASIC16.95■□□□□ 0.3
RC3H1Q5TC82 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 MIR5193-201ENST00000584510 109 ntBASIC16.95■□□□□ 0.3
RC3H1Q5TC82 AL078624.1-201ENST00000604004 547 ntBASIC16.95■□□□□ 0.3
RC3H1Q5TC82 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.95■□□□□ 0.3
RC3H1Q5TC82 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC16.94■□□□□ 0.3
RC3H1Q5TC82 TUBB8P5-201ENST00000445286 1351 ntBASIC16.94■□□□□ 0.3
RC3H1Q5TC82 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms