Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.45□□□□□ -0.1
MTHFRP42898 AC103563.1-201ENST00000429316 123 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MTHFRP42898 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.45□□□□□ -0.1
MTHFRP42898 AC133141.1-201ENST00000443015 339 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.45□□□□□ -0.1
MTHFRP42898 PES1P2-201ENST00000449745 1735 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC14.45□□□□□ -0.1
MTHFRP42898 MIR4746-201ENST00000579802 71 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
MTHFRP42898 AC006116.2-201ENST00000589958 988 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 NEK4P3-201ENST00000604859 544 ntBASIC14.45□□□□□ -0.1
MTHFRP42898 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.45□□□□□ -0.1
MTHFRP42898 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.45□□□□□ -0.1
MTHFRP42898 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MTHFRP42898 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 AC011498.7-201ENST00000624986 2027 ntBASIC14.44□□□□□ -0.1
MTHFRP42898 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 AC015909.5-201ENST00000624336 2266 ntBASIC14.44□□□□□ -0.1
MTHFRP42898 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.44□□□□□ -0.1
MTHFRP42898 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.44□□□□□ -0.1
MTHFRP42898 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.44□□□□□ -0.1
MTHFRP42898 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.44□□□□□ -0.1
MTHFRP42898 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.44□□□□□ -0.1
MTHFRP42898 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.44□□□□□ -0.1
MTHFRP42898 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MTHFRP42898 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
MTHFRP42898 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
MTHFRP42898 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC092810.2-201ENST00000431570 362 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 AP000533.1-201ENST00000456143 1177 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 AC104212.2-201ENST00000478813 628 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC147876.1-201ENST00000504408 322 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms