Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC11.91□□□□□ -0.5
CD40P25942 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC11.91□□□□□ -0.5
CD40P25942 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CD40P25942 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.91□□□□□ -0.5
CD40P25942 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.91□□□□□ -0.5
CD40P25942 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CD40P25942 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD40P25942 AC111170.3-201ENST00000624282 2464 ntBASIC11.91□□□□□ -0.5
CD40P25942 SALL4P6-201ENST00000429385 1691 ntBASIC11.91□□□□□ -0.5
CD40P25942 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.91□□□□□ -0.5
CD40P25942 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
CD40P25942 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 AL355334.1-201ENST00000417713 215 ntBASIC11.9□□□□□ -0.5
CD40P25942 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.9□□□□□ -0.5
CD40P25942 SERPINA7P1-201ENST00000443077 631 ntBASIC11.9□□□□□ -0.5
CD40P25942 AC114501.1-201ENST00000445949 172 ntBASIC11.9□□□□□ -0.5
CD40P25942 AC079250.1-201ENST00000456046 531 ntBASIC11.9□□□□□ -0.5
CD40P25942 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 AC093909.3-201ENST00000504783 336 ntBASIC11.9□□□□□ -0.5
CD40P25942 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC11.9□□□□□ -0.5
CD40P25942 CD44-224ENST00000526669 870 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC11.9□□□□□ -0.5
CD40P25942 AC092115.1-201ENST00000566277 1402 ntBASIC11.9□□□□□ -0.5
CD40P25942 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC11.9□□□□□ -0.5
CD40P25942 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 AL356740.1-201ENST00000602192 1297 ntBASIC11.9□□□□□ -0.5
CD40P25942 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 MIR6746-201ENST00000620971 63 ntBASIC11.9□□□□□ -0.5
CD40P25942 AC127024.7-201ENST00000625101 200 ntBASIC11.9□□□□□ -0.5
CD40P25942 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.9□□□□□ -0.5
CD40P25942 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 FP325330.2-201ENST00000624219 5630 ntBASIC11.9□□□□□ -0.5
CD40P25942 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD40P25942 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC11.9□□□□□ -0.5
CD40P25942 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CD40P25942 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD40P25942 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD40P25942 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.9□□□□□ -0.51
CD40P25942 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD40P25942 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD40P25942 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms