Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AC123912.6-201ENST00000612657 315 ntBASIC16.7■□□□□ 0.26
CSF1RP07333 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.7■□□□□ 0.26
CSF1RP07333 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC16.7■□□□□ 0.26
CSF1RP07333 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CSF1RP07333 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1RP07333 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CSF1RP07333 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1RP07333 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1RP07333 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1RP07333 AC091807.1-201ENST00000418838 1544 ntBASIC16.7■□□□□ 0.26
CSF1RP07333 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1RP07333 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CSF1RP07333 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 CDCA4P4-201ENST00000435216 680 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1RP07333 IGHVII-33-1-201ENST00000524010 280 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 AC079414.2-201ENST00000567157 1104 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.69■□□□□ 0.26
CSF1RP07333 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1RP07333 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC16.69■□□□□ 0.26
CSF1RP07333 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC16.69■□□□□ 0.26
CSF1RP07333 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 AC048382.6-201ENST00000621980 1223 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 LINC00643-207ENST00000637212 734 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSF1RP07333 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 AC130686.1-201ENST00000622936 2466 ntBASIC16.69■□□□□ 0.26
CSF1RP07333 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1RP07333 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSF1RP07333 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1RP07333 RPE-208ENST00000436630 1128 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1RP07333 RPL35P1-201ENST00000450819 370 ntBASIC16.68■□□□□ 0.26
CSF1RP07333 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
CSF1RP07333 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CSF1RP07333 ANKRD26P1-203ENST00000569528 966 ntBASIC16.68■□□□□ 0.26
CSF1RP07333 AP001120.3-201ENST00000585729 489 ntBASIC16.68■□□□□ 0.26
CSF1RP07333 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSF1RP07333 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSF1RP07333 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.68■□□□□ 0.26
CSF1RP07333 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC16.68■□□□□ 0.26
CSF1RP07333 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1RP07333 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1RP07333 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CSF1RP07333 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSF1RP07333 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC16.67■□□□□ 0.26
CSF1RP07333 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CSF1RP07333 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1RP07333 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms