Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC010141.1-201ENST00000411585 623 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AL645933.1-201ENST00000440087 609 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC012441.1-201ENST00000446669 685 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC008764.8-201ENST00000623966 2717 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 CTAGE10P-201ENST00000318353 2408 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 DFFBP1-201ENST00000433250 979 ntBASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 FAM8A4P-201ENST00000435433 1213 ntBASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms