Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 DNM1P41-201ENST00000623634 3350 ntBASIC12.32□□□□□ -0.44
DUX4Q9UBX2 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 PUDPP3-201ENST00000445368 636 ntBASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 AC022497.1-201ENST00000624916 3691 ntBASIC12.32□□□□□ -0.44
DUX4Q9UBX2 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC12.32□□□□□ -0.44
DUX4Q9UBX2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 VENTXP1-201ENST00000569334 2716 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 PCDHA9-201ENST00000378122 6900 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DUX4Q9UBX2 MTX1P1-201ENST00000440904 838 ntBASIC12.31□□□□□ -0.44
DUX4Q9UBX2 GOLGA2P4-201ENST00000441462 777 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms