Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC068831.5-201ENST00000557387 328 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 DNM1P51-201ENST00000558149 522 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC006548.2-201ENST00000605217 529 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 CR392039.2-201ENST00000623182 509 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AP000769.1-203ENST00000637245 208 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC040160.2-201ENST00000623816 1675 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRIT1Q9P2V4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AC104212.2-201ENST00000478813 628 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TBC1D3P6-201ENST00000505954 962 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AL359219.1-201ENST00000556311 934 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TYMSP2-201ENST00000589501 424 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AF013593.1-201ENST00000458074 1487 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 SALL4P6-201ENST00000429385 1691 ntBASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRIT1Q9P2V4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRIT1Q9P2V4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms